Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 AC133561.1-201ENST00000568600 2415 ntBASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3H4Q9UPT8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 KRT18P68-201ENST00000392293 1000 ntBASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 RARRES2P10-201ENST00000564312 460 ntBASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 AC138932.3-201ENST00000567634 1902 ntBASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.43■■□□□ 1.66
ZC3H4Q9UPT8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 AC239809.2-201ENST00000415381 517 ntBASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 AC061975.6-201ENST00000579045 1553 ntBASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ZC3H4Q9UPT8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 AC092865.7-201ENST00000641832 219 ntBASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3H4Q9UPT8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 C2orf69P4-201ENST00000565394 541 ntBASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 AC110285.5-201ENST00000611501 352 ntBASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZC3H4Q9UPT8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 AL049597.2-201ENST00000565575 961 ntBASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 AL353708.3-201ENST00000610272 989 ntBASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
ZC3H4Q9UPT8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZC3H4Q9UPT8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3H4Q9UPT8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms