Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 AC098934.4-201ENST00000564127 592 ntBASIC21.84■■□□□ 1.09
SMG5Q9UPR3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.84■■□□□ 1.09
SMG5Q9UPR3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 SMUG1P1-201ENST00000590640 811 ntBASIC21.83■■□□□ 1.09
SMG5Q9UPR3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SMG5Q9UPR3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMG5Q9UPR3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMG5Q9UPR3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SMG5Q9UPR3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SMG5Q9UPR3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SMG5Q9UPR3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 PRORSD1P-201ENST00000295112 541 ntBASIC21.82■■□□□ 1.08
SMG5Q9UPR3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.82■■□□□ 1.08
SMG5Q9UPR3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 AF201337.1-201ENST00000520239 748 ntBASIC21.81■■□□□ 1.08
SMG5Q9UPR3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 UBE2DNL-204ENST00000602536 740 ntBASIC21.81■■□□□ 1.08
SMG5Q9UPR3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMG5Q9UPR3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 AC104187.1-201ENST00000607510 612 ntBASIC21.8■■□□□ 1.08
SMG5Q9UPR3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 AC073130.3-201ENST00000624389 2278 ntBASIC21.8■■□□□ 1.08
SMG5Q9UPR3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMG5Q9UPR3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 AC105036.2-201ENST00000569468 176 ntBASIC21.79■■□□□ 1.08
SMG5Q9UPR3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.79■■□□□ 1.08
SMG5Q9UPR3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms