Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHA4Q9UN74 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 AC010536.3-201ENST00000620306 533 ntBASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA4Q9UN74 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PCDHA4Q9UN74 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 AC011767.1-201ENST00000617410 1153 ntBASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 BID-214ENST00000617586 542 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA4Q9UN74 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 TERF1P5-201ENST00000477545 1207 ntBASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHA4Q9UN74 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
PCDHA4Q9UN74 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHA4Q9UN74 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHA4Q9UN74 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHA4Q9UN74 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 AL137784.2-201ENST00000607332 1000 ntBASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA4Q9UN74 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms