Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 TERF1P5-201ENST00000477545 1207 ntBASIC23.93■■□□□ 1.42
DDX41Q9UJV9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DDX41Q9UJV9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DDX41Q9UJV9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 AC133552.2-202ENST00000575694 574 ntBASIC23.91■■□□□ 1.42
DDX41Q9UJV9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.91■■□□□ 1.42
DDX41Q9UJV9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 AC013268.1-206ENST00000638368 961 ntBASIC23.9■■□□□ 1.42
DDX41Q9UJV9 AC112229.1-201ENST00000639295 961 ntBASIC23.9■■□□□ 1.42
DDX41Q9UJV9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DDX41Q9UJV9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
DDX41Q9UJV9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
DDX41Q9UJV9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 FBXW4P1-201ENST00000426721 2239 ntBASIC23.89■■□□□ 1.41
DDX41Q9UJV9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.89■■□□□ 1.41
DDX41Q9UJV9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 AC068338.2-201ENST00000563278 1430 ntBASIC23.88■■□□□ 1.41
DDX41Q9UJV9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 AF201337.1-201ENST00000520239 748 ntBASIC23.88■■□□□ 1.41
DDX41Q9UJV9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 AL138781.1-201ENST00000566567 1274 ntBASIC23.88■■□□□ 1.41
DDX41Q9UJV9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 AC008175.2-201ENST00000612840 297 ntBASIC23.88■■□□□ 1.41
DDX41Q9UJV9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DDX41Q9UJV9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.87■■□□□ 1.41
DDX41Q9UJV9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms