Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
C9orf78Q9NZ63 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
C9orf78Q9NZ63 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 AC133552.2-202ENST00000575694 574 ntBASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
C9orf78Q9NZ63 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
C9orf78Q9NZ63 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
C9orf78Q9NZ63 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC26.2■■□□□ 1.79
C9orf78Q9NZ63 AF201337.1-201ENST00000520239 748 ntBASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.2■■□□□ 1.78
C9orf78Q9NZ63 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 AC091799.1-201ENST00000422823 811 ntBASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 AC105036.2-201ENST00000569468 176 ntBASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
C9orf78Q9NZ63 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 AC008694.1-202ENST00000636953 945 ntBASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
C9orf78Q9NZ63 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 TSPY6P-201ENST00000448518 926 ntBASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 AC069236.1-201ENST00000604339 616 ntBASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC26.17■■□□□ 1.78
C9orf78Q9NZ63 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 Z98882.1-201ENST00000622160 2253 ntBASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 AL162412.1-201ENST00000567129 965 ntBASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 OR10C1-204ENST00000622521 1039 ntBASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
C9orf78Q9NZ63 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
C9orf78Q9NZ63 AC016405.3-201ENST00000607710 860 ntBASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms