Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18■□□□□ 0.47
C12orf4Q9NQ89 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18■□□□□ 0.47
C12orf4Q9NQ89 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 MIR3181-201ENST00000578512 73 ntBASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 AC092171.4-201ENST00000609130 632 ntBASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 AC026471.6-201ENST00000622954 1905 ntBASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C12orf4Q9NQ89 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C12orf4Q9NQ89 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 SRD5A1P1-201ENST00000442297 786 ntBASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C12orf4Q9NQ89 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 AC010141.3-201ENST00000456659 717 ntBASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.96■□□□□ 0.47
C12orf4Q9NQ89 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms