Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 AC007322.3-201ENST00000426526 701 ntBASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 AC069152.1-201ENST00000438030 544 ntBASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 SLC7A5P1-201ENST00000568957 537 ntBASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 MKRN4P-201ENST00000444706 1521 ntBASIC18.71■□□□□ 0.59
KIAA1549Q9HCM3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 AC026310.3-201ENST00000625186 2373 ntBASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 AC105036.2-201ENST00000569468 176 ntBASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.7■□□□□ 0.58
KIAA1549Q9HCM3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 AC120498.10-201ENST00000621827 505 ntBASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KIAA1549Q9HCM3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 AC093787.1-201ENST00000450396 207 ntBASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KIAA1549Q9HCM3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 AL024507.2-201ENST00000606070 2574 ntBASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KIAA1549Q9HCM3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 KRT18P6-201ENST00000555540 1265 ntBASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.66■□□□□ 0.58
KIAA1549Q9HCM3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KIAA1549Q9HCM3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.65■□□□□ 0.58
KIAA1549Q9HCM3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KIAA1549Q9HCM3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KIAA1549Q9HCM3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms