Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.02■■□□□ 1.44
ZFYVE28Q9HCC9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 AL049637.2-201ENST00000641778 930 ntBASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ZFYVE28Q9HCC9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24■■□□□ 1.43
ZFYVE28Q9HCC9 AC087742.1-201ENST00000575880 1738 ntBASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 MIR4785-201ENST00000585005 73 ntBASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 AC139530.1-201ENST00000575312 1977 ntBASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ZFYVE28Q9HCC9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 AC087499.1-201ENST00000418141 1075 ntBASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 AC007322.3-201ENST00000426526 701 ntBASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 MTDHP1-201ENST00000605323 784 ntBASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
ZFYVE28Q9HCC9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AC133681.1-201ENST00000465482 601 ntBASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AL135905.2-201ENST00000584934 1404 ntBASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 AC124016.1-201ENST00000609552 612 ntBASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ZFYVE28Q9HCC9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ZFYVE28Q9HCC9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms