Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.22■□□□□ 0.99
CDC42EP4Q9H3Q1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 AC112907.3-201ENST00000577781 2400 ntBASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42EP4Q9H3Q1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 GUSBP5-201ENST00000418136 578 ntBASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 AL512408.1-201ENST00000569378 2000 ntBASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42EP4Q9H3Q1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 DUX4L19-201ENST00000557448 1267 ntBASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42EP4Q9H3Q1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 AL162377.1-201ENST00000618844 1793 ntBASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42EP4Q9H3Q1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 AL035685.1-201ENST00000636663 812 ntBASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDC42EP4Q9H3Q1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms