Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 ISG20-202ENST00000379224 540 ntTSL 3 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 RPS20-210ENST00000523936 899 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS33BQ9H267 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS33BQ9H267 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS33BQ9H267 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.34■■□□□ 1.65
VPS33BQ9H267 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 AC233702.5-201ENST00000584107 538 ntBASIC25.34■■□□□ 1.65
VPS33BQ9H267 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
VPS33BQ9H267 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
VPS33BQ9H267 CYP21A1P-202ENST00000354927 1481 ntBASIC25.34■■□□□ 1.65
VPS33BQ9H267 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS33BQ9H267 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.33■■□□□ 1.65
VPS33BQ9H267 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS33BQ9H267 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.33■■□□□ 1.65
VPS33BQ9H267 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS33BQ9H267 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VPS33BQ9H267 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
VPS33BQ9H267 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
VPS33BQ9H267 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC25.32■■□□□ 1.64
VPS33BQ9H267 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
VPS33BQ9H267 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VPS33BQ9H267 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.31■■□□□ 1.64
VPS33BQ9H267 MIR1224-201ENST00000408193 85 ntBASIC25.31■■□□□ 1.64
VPS33BQ9H267 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 AC133681.1-201ENST00000465482 601 ntBASIC25.31■■□□□ 1.64
VPS33BQ9H267 AC105020.6-201ENST00000621523 1217 ntBASIC25.31■■□□□ 1.64
VPS33BQ9H267 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
VPS33BQ9H267 KRT17P2-201ENST00000300992 1314 ntBASIC25.31■■□□□ 1.64
VPS33BQ9H267 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
VPS33BQ9H267 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
VPS33BQ9H267 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 RPS2P55-201ENST00000397318 883 ntBASIC25.3■■□□□ 1.64
VPS33BQ9H267 AC107956.1-201ENST00000494359 873 ntBASIC25.3■■□□□ 1.64
VPS33BQ9H267 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
VPS33BQ9H267 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
VPS33BQ9H267 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
VPS33BQ9H267 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.29■■□□□ 1.64
VPS33BQ9H267 AC093323.1-202ENST00000635031 2045 ntBASIC25.29■■□□□ 1.64
VPS33BQ9H267 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
VPS33BQ9H267 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.29■■□□□ 1.64
VPS33BQ9H267 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.29■■□□□ 1.64
VPS33BQ9H267 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
VPS33BQ9H267 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.29■■□□□ 1.64
VPS33BQ9H267 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
VPS33BQ9H267 NFE2L3P1-201ENST00000588207 1959 ntBASIC25.29■■□□□ 1.64
VPS33BQ9H267 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
VPS33BQ9H267 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 BX088651.1-201ENST00000540551 451 ntBASIC25.28■■□□□ 1.64
VPS33BQ9H267 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 AP001412.1-201ENST00000608405 714 ntBASIC25.28■■□□□ 1.64
VPS33BQ9H267 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.28■■□□□ 1.64
VPS33BQ9H267 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
VPS33BQ9H267 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
VPS33BQ9H267 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.27■■□□□ 1.64
VPS33BQ9H267 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.27■■□□□ 1.64
VPS33BQ9H267 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms