Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPTBN4Q9H254 AC243732.1-201ENST00000612648 864 ntBASIC20.22■□□□□ 0.83
SPTBN4Q9H254 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 KRASP1-201ENST00000407852 552 ntBASIC20.21■□□□□ 0.83
SPTBN4Q9H254 AL390955.1-201ENST00000428694 934 ntBASIC20.21■□□□□ 0.83
SPTBN4Q9H254 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTBN4Q9H254 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
SPTBN4Q9H254 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 AF186192.3-201ENST00000583427 947 ntBASIC20.2■□□□□ 0.82
SPTBN4Q9H254 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 CLEC4GP1-201ENST00000596555 870 ntBASIC20.2■□□□□ 0.82
SPTBN4Q9H254 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTBN4Q9H254 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 AL353803.4-201ENST00000565882 1934 ntBASIC20.19■□□□□ 0.82
SPTBN4Q9H254 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 AC120498.8-201ENST00000614275 531 ntBASIC20.19■□□□□ 0.82
SPTBN4Q9H254 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 AK4P3-201ENST00000418260 669 ntBASIC20.19■□□□□ 0.82
SPTBN4Q9H254 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTBN4Q9H254 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTBN4Q9H254 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 HCG4P8-203ENST00000443049 980 ntBASIC20.17■□□□□ 0.82
SPTBN4Q9H254 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 REXO1L10P-201ENST00000615707 1290 ntBASIC20.17■□□□□ 0.82
SPTBN4Q9H254 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 AC027702.1-201ENST00000563810 1770 ntBASIC20.17■□□□□ 0.82
SPTBN4Q9H254 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 AP000525.1-201ENST00000608286 694 ntBASIC20.17■□□□□ 0.82
SPTBN4Q9H254 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPTBN4Q9H254 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 KRT8P10-201ENST00000450021 1447 ntBASIC20.16■□□□□ 0.82
SPTBN4Q9H254 AP000347.1-202ENST00000435868 847 ntBASIC20.16■□□□□ 0.82
SPTBN4Q9H254 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 AC006011.2-201ENST00000621313 1158 ntBASIC20.16■□□□□ 0.82
SPTBN4Q9H254 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPTBN4Q9H254 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms