Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DUX4L8-201ENST00000629013 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L3-201ENST00000630187 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L7-201ENST00000630678 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUX4L5-201ENST00000630834 1275 ntBASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
FOXP3Q9BZS1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 AL358852.1-201ENST00000623174 1268 ntBASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FOXP3Q9BZS1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 AL121603.2-201ENST00000557373 2117 ntBASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXP3Q9BZS1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
FOXP3Q9BZS1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 MIR572-201ENST00000384983 95 ntBASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXP3Q9BZS1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 AC027612.3-201ENST00000413684 1047 ntBASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 AC012414.1-201ENST00000556676 535 ntBASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXP3Q9BZS1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 AC090192.1-201ENST00000517740 490 ntBASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms