Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
LCE3DQ9BYE3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 AL049796.1-201ENST00000565336 1766 ntBASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 PCDHAC2-203ENST00000615316 3011 ntBASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ABHD17AP4-201ENST00000411545 909 ntBASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 DUX4L4-201ENST00000566884 1269 ntBASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 C17orf82-201ENST00000623772 1530 ntBASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC5.62□□□□□ -1.51
LCE3DQ9BYE3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LCE3DQ9BYE3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms