Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 AL391422.3-201ENST00000603791 2761 ntBASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 AL354811.1-201ENST00000610286 706 ntBASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 AC019069.1-201ENST00000610008 1333 ntBASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 AC007225.1-201ENST00000566331 1836 ntBASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RSPO3Q9BXY4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO3Q9BXY4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO3Q9BXY4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 AC142381.2-201ENST00000566120 298 ntBASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO3Q9BXY4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 AC105265.2-201ENST00000467189 838 ntBASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 AL358852.1-201ENST00000623174 1268 ntBASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RSPO3Q9BXY4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO3Q9BXY4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms