Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
UPK3BQ9BT76 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 AC003102.1-202ENST00000563394 1796 ntBASIC14.45□□□□□ -0.1
UPK3BQ9BT76 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 KRT16P2-201ENST00000414673 1423 ntBASIC14.45□□□□□ -0.1
UPK3BQ9BT76 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 DUX4L16-201ENST00000555130 1264 ntBASIC14.45□□□□□ -0.1
UPK3BQ9BT76 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UPK3BQ9BT76 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 ID1-201ENST00000376105 1233 ntBASIC14.44□□□□□ -0.1
UPK3BQ9BT76 AC006970.2-201ENST00000450065 779 ntBASIC14.44□□□□□ -0.1
UPK3BQ9BT76 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 AC010536.3-201ENST00000620306 533 ntBASIC14.44□□□□□ -0.1
UPK3BQ9BT76 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UPK3BQ9BT76 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AC007322.1-201ENST00000426983 750 ntBASIC14.43□□□□□ -0.1
UPK3BQ9BT76 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AC013268.1-206ENST00000638368 961 ntBASIC14.43□□□□□ -0.1
UPK3BQ9BT76 AC112229.1-201ENST00000639295 961 ntBASIC14.43□□□□□ -0.1
UPK3BQ9BT76 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UPK3BQ9BT76 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms