Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 C11orf96-202ENST00000528572 1834 ntBASIC16.18■□□□□ 0.18
DUX3Q96PT4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 POU5F1P4-201ENST00000413175 1085 ntBASIC16.18■□□□□ 0.18
DUX3Q96PT4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 CYP2T1P-201ENST00000432607 1285 ntBASIC16.18■□□□□ 0.18
DUX3Q96PT4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 TSPY6P-201ENST00000448518 926 ntBASIC16.18■□□□□ 0.18
DUX3Q96PT4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.18■□□□□ 0.18
DUX3Q96PT4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 AC068338.2-201ENST00000563278 1430 ntBASIC16.18■□□□□ 0.18
DUX3Q96PT4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DUX3Q96PT4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 SLC29A4P1-201ENST00000398760 971 ntBASIC16.17■□□□□ 0.18
DUX3Q96PT4 GUSBP6-202ENST00000438529 1198 ntBASIC16.17■□□□□ 0.18
DUX3Q96PT4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 AF201337.1-201ENST00000520239 748 ntBASIC16.17■□□□□ 0.18
DUX3Q96PT4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
DUX3Q96PT4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 AC242852.2-201ENST00000615738 1807 ntBASIC16.17■□□□□ 0.18
DUX3Q96PT4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
DUX3Q96PT4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 AL117328.2-201ENST00000624617 1940 ntBASIC16.16■□□□□ 0.18
DUX3Q96PT4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 SLC7A5P1-201ENST00000568957 537 ntBASIC16.16■□□□□ 0.18
DUX3Q96PT4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
DUX3Q96PT4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
DUX3Q96PT4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 AC098934.4-201ENST00000564127 592 ntBASIC16.15■□□□□ 0.18
DUX3Q96PT4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 AC016405.3-201ENST00000607710 860 ntBASIC16.15■□□□□ 0.18
DUX3Q96PT4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
DUX3Q96PT4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
DUX3Q96PT4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
DUX3Q96PT4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
DUX3Q96PT4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 AC079834.2-201ENST00000609776 1949 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms