Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 AC008406.3-201ENST00000620001 1374 ntBASIC19.81■□□□□ 0.76
CCDC115Q96NT0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.81■□□□□ 0.76
CCDC115Q96NT0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC115Q96NT0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 AP001330.3-201ENST00000520123 633 ntBASIC19.8■□□□□ 0.76
CCDC115Q96NT0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC115Q96NT0 BX005040.4-201ENST00000637145 1518 ntBASIC19.8■□□□□ 0.76
CCDC115Q96NT0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 EDA-201ENST00000338901 1233 ntBASIC19.79■□□□□ 0.76
CCDC115Q96NT0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC115Q96NT0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 AC073314.1-201ENST00000568729 2216 ntBASIC19.78■□□□□ 0.76
CCDC115Q96NT0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 MIR572-201ENST00000384983 95 ntBASIC19.78■□□□□ 0.76
CCDC115Q96NT0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC115Q96NT0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC115Q96NT0 PLK5-205ENST00000642079 1969 ntBASIC19.77■□□□□ 0.75
CCDC115Q96NT0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 RASA4CP-201ENST00000424092 1398 ntBASIC19.76■□□□□ 0.75
CCDC115Q96NT0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC115Q96NT0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 MIR939-201ENST00000401314 82 ntBASIC19.75■□□□□ 0.75
CCDC115Q96NT0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC115Q96NT0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms