Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.9■□□□□ 0.14
LINC00479Q96M42 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LINC00479Q96M42 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00479Q96M42 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.9■□□□□ 0.14
LINC00479Q96M42 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00479Q96M42 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00479Q96M42 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LINC00479Q96M42 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
LINC00479Q96M42 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 AC121338.2-201ENST00000622535 1744 ntBASIC15.89■□□□□ 0.13
LINC00479Q96M42 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 AC099791.2-201ENST00000605725 427 ntBASIC15.89■□□□□ 0.13
LINC00479Q96M42 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 AC007225.1-201ENST00000566331 1836 ntBASIC15.89■□□□□ 0.13
LINC00479Q96M42 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LINC00479Q96M42 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.89■□□□□ 0.13
LINC00479Q96M42 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LINC00479Q96M42 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.88■□□□□ 0.13
LINC00479Q96M42 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINC00479Q96M42 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LINC00479Q96M42 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LINC00479Q96M42 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LINC00479Q96M42 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 AL512408.1-201ENST00000569378 2000 ntBASIC15.87■□□□□ 0.13
LINC00479Q96M42 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 OR2I1P-207ENST00000453522 948 ntBASIC15.87■□□□□ 0.13
LINC00479Q96M42 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 AC010525.1-201ENST00000585559 441 ntBASIC15.87■□□□□ 0.13
LINC00479Q96M42 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.87■□□□□ 0.13
LINC00479Q96M42 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LINC00479Q96M42 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 AC239859.2-201ENST00000444165 318 ntBASIC15.86■□□□□ 0.13
LINC00479Q96M42 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 MIR3181-201ENST00000578512 73 ntBASIC15.86■□□□□ 0.13
LINC00479Q96M42 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LINC00479Q96M42 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LINC00479Q96M42 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms