Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 AC133681.1-201ENST00000465482 601 ntBASIC17.77■□□□□ 0.44
SPG11Q96JI7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 AL355075.4-201ENST00000554988 638 ntBASIC17.77■□□□□ 0.44
SPG11Q96JI7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SPG11Q96JI7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SPG11Q96JI7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPG11Q96JI7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPG11Q96JI7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.43
SPG11Q96JI7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.77■□□□□ 0.43
SPG11Q96JI7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.77■□□□□ 0.43
SPG11Q96JI7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SPG11Q96JI7 AP001412.1-201ENST00000608405 714 ntBASIC17.77■□□□□ 0.43
SPG11Q96JI7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.77■□□□□ 0.43
SPG11Q96JI7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.76■□□□□ 0.43
SPG11Q96JI7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SPG11Q96JI7 MIR4785-201ENST00000585005 73 ntBASIC17.76■□□□□ 0.43
SPG11Q96JI7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.75■□□□□ 0.43
SPG11Q96JI7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SPG11Q96JI7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.75■□□□□ 0.43
SPG11Q96JI7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
SPG11Q96JI7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.75■□□□□ 0.43
SPG11Q96JI7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 AC003102.1-202ENST00000563394 1796 ntBASIC17.75■□□□□ 0.43
SPG11Q96JI7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPG11Q96JI7 MCRIP2P1-201ENST00000394346 511 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 TSPY15P-201ENST00000457163 923 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 RPS2P55-201ENST00000397318 883 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 AC107956.1-201ENST00000494359 873 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 AL353708.3-201ENST00000610272 989 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SPG11Q96JI7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPG11Q96JI7 AC087742.1-201ENST00000575880 1738 ntBASIC17.74■□□□□ 0.43
SPG11Q96JI7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 AC092368.3-202ENST00000574180 1591 ntBASIC17.73■□□□□ 0.43
SPG11Q96JI7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 TSPY7P-201ENST00000431358 1114 ntBASIC17.73■□□□□ 0.43
SPG11Q96JI7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SPG11Q96JI7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms