Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 Z99916.2-201ENST00000604037 246 ntBASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.82■□□□□ 0.6
SNRNP40Q96DI7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 KRT18P68-201ENST00000392293 1000 ntBASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 AC073912.3-201ENST00000624414 853 ntBASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNRNP40Q96DI7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 ECEL1P3-201ENST00000427961 737 ntBASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNRNP40Q96DI7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 AC233263.1-201ENST00000578059 224 ntBASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNRNP40Q96DI7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 SNORA78-201ENST00000459373 127 ntBASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 SOX15-203ENST00000570788 1093 ntBASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNRNP40Q96DI7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms