Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC1Q92922 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SMARCC1Q92922 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 AC211429.1-201ENST00000415277 523 ntBASIC26.87■■□□□ 1.89
SMARCC1Q92922 POM121L13P-201ENST00000422362 380 ntBASIC26.87■■□□□ 1.89
SMARCC1Q92922 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC1Q92922 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
SMARCC1Q92922 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCC1Q92922 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCC1Q92922 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCC1Q92922 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC1Q92922 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.86■■□□□ 1.89
SMARCC1Q92922 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCC1Q92922 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC1Q92922 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC1Q92922 FAM210CP-201ENST00000445714 574 ntBASIC26.85■■□□□ 1.89
SMARCC1Q92922 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC1Q92922 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.85■■□□□ 1.89
SMARCC1Q92922 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC1Q92922 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.84■■□□□ 1.89
SMARCC1Q92922 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC1Q92922 AC093323.1-202ENST00000635031 2045 ntBASIC26.83■■□□□ 1.89
SMARCC1Q92922 C11orf96-202ENST00000528572 1834 ntBASIC26.83■■□□□ 1.89
SMARCC1Q92922 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.83■■□□□ 1.89
SMARCC1Q92922 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.83■■□□□ 1.89
SMARCC1Q92922 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SMARCC1Q92922 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.83■■□□□ 1.89
SMARCC1Q92922 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC1Q92922 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.82■■□□□ 1.88
SMARCC1Q92922 CYP21A1P-202ENST00000354927 1481 ntBASIC26.82■■□□□ 1.88
SMARCC1Q92922 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC1Q92922 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.82■■□□□ 1.88
SMARCC1Q92922 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC1Q92922 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC26.82■■□□□ 1.88
SMARCC1Q92922 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC1Q92922 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC1Q92922 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC1Q92922 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.82■■□□□ 1.88
SMARCC1Q92922 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 AC012618.2-201ENST00000428058 849 ntBASIC26.81■■□□□ 1.88
SMARCC1Q92922 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 AC105020.6-201ENST00000621523 1217 ntBASIC26.81■■□□□ 1.88
SMARCC1Q92922 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC1Q92922 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.81■■□□□ 1.88
SMARCC1Q92922 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms