Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
SHC3Q92529 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SHC3Q92529 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.26■■□□□ 1.15
SHC3Q92529 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.26■■□□□ 1.15
SHC3Q92529 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.26■■□□□ 1.15
SHC3Q92529 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.26■■□□□ 1.15
SHC3Q92529 AC120498.10-201ENST00000621827 505 ntBASIC22.26■■□□□ 1.15
SHC3Q92529 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.26■■□□□ 1.15
SHC3Q92529 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SHC3Q92529 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SHC3Q92529 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SHC3Q92529 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC22.25■■□□□ 1.15
SHC3Q92529 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
SHC3Q92529 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.25■■□□□ 1.15
SHC3Q92529 AC087623.3-201ENST00000607047 1098 ntBASIC22.25■■□□□ 1.15
SHC3Q92529 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
SHC3Q92529 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SHC3Q92529 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SHC3Q92529 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.25■■□□□ 1.15
SHC3Q92529 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SHC3Q92529 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SHC3Q92529 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SHC3Q92529 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.24■■□□□ 1.15
SHC3Q92529 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.24■■□□□ 1.15
SHC3Q92529 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 AC034268.1-201ENST00000441047 882 ntBASIC22.24■■□□□ 1.15
SHC3Q92529 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.24■■□□□ 1.15
SHC3Q92529 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC3Q92529 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.24■■□□□ 1.15
SHC3Q92529 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
SHC3Q92529 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SHC3Q92529 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC3Q92529 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 KRT19P1-201ENST00000405746 1186 ntBASIC22.23■■□□□ 1.15
SHC3Q92529 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SHC3Q92529 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
SHC3Q92529 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SHC3Q92529 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.23■■□□□ 1.15
SHC3Q92529 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SHC3Q92529 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC3Q92529 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.22■■□□□ 1.15
SHC3Q92529 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.22■■□□□ 1.15
SHC3Q92529 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.22■■□□□ 1.15
SHC3Q92529 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.22■■□□□ 1.15
SHC3Q92529 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SHC3Q92529 AC011484.1-201ENST00000377652 1995 ntBASIC22.21■■□□□ 1.15
SHC3Q92529 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SHC3Q92529 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.21■■□□□ 1.15
SHC3Q92529 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SHC3Q92529 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SHC3Q92529 AC026271.2-201ENST00000428091 497 ntBASIC22.21■■□□□ 1.15
SHC3Q92529 AC245052.3-201ENST00000450182 901 ntBASIC22.21■■□□□ 1.15
SHC3Q92529 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.21■■□□□ 1.15
SHC3Q92529 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.21■■□□□ 1.15
SHC3Q92529 SLC7A5P1-201ENST00000568957 537 ntBASIC22.21■■□□□ 1.15
SHC3Q92529 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.21■■□□□ 1.15
SHC3Q92529 NTF6G-201ENST00000591094 616 ntBASIC22.21■■□□□ 1.15
SHC3Q92529 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms