Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF138Q8WVD3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.97■□□□□ 0.63
RNF138Q8WVD3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.97■□□□□ 0.63
RNF138Q8WVD3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 AC007322.1-201ENST00000426983 750 ntBASIC18.97■□□□□ 0.63
RNF138Q8WVD3 CROCCP5-201ENST00000436658 830 ntBASIC18.97■□□□□ 0.63
RNF138Q8WVD3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 AL591742.1-201ENST00000604433 565 ntBASIC18.97■□□□□ 0.63
RNF138Q8WVD3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF138Q8WVD3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF138Q8WVD3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 FAM21FP-204ENST00000608637 956 ntBASIC18.95■□□□□ 0.62
RNF138Q8WVD3 AL050303.2-201ENST00000619798 666 ntBASIC18.95■□□□□ 0.62
RNF138Q8WVD3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF138Q8WVD3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF138Q8WVD3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.93■□□□□ 0.62
RNF138Q8WVD3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
RNF138Q8WVD3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 AC090192.1-201ENST00000517740 490 ntBASIC18.92■□□□□ 0.62
RNF138Q8WVD3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 AC005181.1-201ENST00000604782 1256 ntBASIC18.92■□□□□ 0.62
RNF138Q8WVD3 AC016405.3-201ENST00000607710 860 ntBASIC18.92■□□□□ 0.62
RNF138Q8WVD3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF138Q8WVD3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF138Q8WVD3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF138Q8WVD3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF138Q8WVD3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF138Q8WVD3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF138Q8WVD3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms