Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.87■■□□□ 1.41
U2AF1L4Q8WU68 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
U2AF1L4Q8WU68 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
U2AF1L4Q8WU68 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
U2AF1L4Q8WU68 GUSBP5-202ENST00000510805 1989 ntBASIC23.87■■□□□ 1.41
U2AF1L4Q8WU68 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 LSM12P1-201ENST00000411836 588 ntBASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.86■■□□□ 1.41
U2AF1L4Q8WU68 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 CYP2T3P-201ENST00000601990 817 ntBASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
U2AF1L4Q8WU68 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 AC008175.2-201ENST00000612840 297 ntBASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.84■■□□□ 1.41
U2AF1L4Q8WU68 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
U2AF1L4Q8WU68 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
U2AF1L4Q8WU68 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
U2AF1L4Q8WU68 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
U2AF1L4Q8WU68 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 AC060766.5-201ENST00000590539 871 ntBASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 RBM17P2-201ENST00000616397 1405 ntBASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
U2AF1L4Q8WU68 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
U2AF1L4Q8WU68 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms