Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.66■■□□□ 1.06
CCHCR1Q8TD31 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 FEM1AP1-201ENST00000431297 1995 ntBASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 SMUG1P1-201ENST00000590640 811 ntBASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 AC007952.6-201ENST00000573168 2673 ntBASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 AC003957.1-201ENST00000625108 2673 ntBASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCHCR1Q8TD31 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCHCR1Q8TD31 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCHCR1Q8TD31 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCHCR1Q8TD31 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCHCR1Q8TD31 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.06
CCHCR1Q8TD31 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.64■■□□□ 1.05
CCHCR1Q8TD31 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCHCR1Q8TD31 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 AC006128.1-201ENST00000624704 1661 ntBASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.62■■□□□ 1.05
CCHCR1Q8TD31 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCHCR1Q8TD31 LINC01006-201ENST00000333319 2292 ntBASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.6■■□□□ 1.05
CCHCR1Q8TD31 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms