Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIML1Q8N9V2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 AC012414.1-201ENST00000556676 535 ntBASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIML1Q8N9V2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 AC091305.1-201ENST00000479476 895 ntBASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TRIML1Q8N9V2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIML1Q8N9V2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 AF213884.3-201ENST00000563833 479 ntBASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 AC027702.1-201ENST00000563810 1770 ntBASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIML1Q8N9V2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 AL031432.3-201ENST00000607698 485 ntBASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 AP004607.4-201ENST00000530158 1459 ntBASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TRIML1Q8N9V2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 SUDS3P1-201ENST00000505831 966 ntBASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 RARRES2P6-201ENST00000567333 442 ntBASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TRIML1Q8N9V2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms