Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
XRN1Q8IZH2 AC124016.1-201ENST00000609552 612 ntBASIC29.31■■■□□ 2.28
XRN1Q8IZH2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.3■■■□□ 2.28
XRN1Q8IZH2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 RPS2P55-201ENST00000397318 883 ntBASIC29.29■■■□□ 2.28
XRN1Q8IZH2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 AC107956.1-201ENST00000494359 873 ntBASIC29.29■■■□□ 2.28
XRN1Q8IZH2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
XRN1Q8IZH2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 AC133681.1-201ENST00000465482 601 ntBASIC29.28■■■□□ 2.28
XRN1Q8IZH2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC29.28■■■□□ 2.28
XRN1Q8IZH2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 KRT18P68-201ENST00000392293 1000 ntBASIC29.27■■■□□ 2.28
XRN1Q8IZH2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
XRN1Q8IZH2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
XRN1Q8IZH2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
XRN1Q8IZH2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.26■■■□□ 2.28
XRN1Q8IZH2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
XRN1Q8IZH2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 MTDHP1-201ENST00000605323 784 ntBASIC29.26■■■□□ 2.27
XRN1Q8IZH2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC29.26■■■□□ 2.27
XRN1Q8IZH2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
XRN1Q8IZH2 AC012306.2-201ENST00000609350 630 ntBASIC29.25■■■□□ 2.27
XRN1Q8IZH2 AL049637.2-201ENST00000641778 930 ntBASIC29.25■■■□□ 2.27
XRN1Q8IZH2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
XRN1Q8IZH2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
XRN1Q8IZH2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
XRN1Q8IZH2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
XRN1Q8IZH2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
XRN1Q8IZH2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms