Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
DDX60Q8IY21 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.96■■□□□ 1.75
DDX60Q8IY21 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.95■■□□□ 1.75
DDX60Q8IY21 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
DDX60Q8IY21 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX60Q8IY21 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX60Q8IY21 AC006058.3-201ENST00000606217 1069 ntBASIC25.95■■□□□ 1.74
DDX60Q8IY21 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX60Q8IY21 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
DDX60Q8IY21 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.95■■□□□ 1.74
DDX60Q8IY21 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.95■■□□□ 1.74
DDX60Q8IY21 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.94■■□□□ 1.74
DDX60Q8IY21 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.94■■□□□ 1.74
DDX60Q8IY21 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
DDX60Q8IY21 CDV3P1-201ENST00000471403 739 ntBASIC25.94■■□□□ 1.74
DDX60Q8IY21 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX60Q8IY21 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.94■■□□□ 1.74
DDX60Q8IY21 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX60Q8IY21 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
DDX60Q8IY21 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.93■■□□□ 1.74
DDX60Q8IY21 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX60Q8IY21 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
DDX60Q8IY21 MCRIP2P1-201ENST00000394346 511 ntBASIC25.93■■□□□ 1.74
DDX60Q8IY21 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
DDX60Q8IY21 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
DDX60Q8IY21 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
DDX60Q8IY21 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX60Q8IY21 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX60Q8IY21 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX60Q8IY21 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
DDX60Q8IY21 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
DDX60Q8IY21 AC026366.1-201ENST00000488803 879 ntBASIC25.92■■□□□ 1.74
DDX60Q8IY21 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.92■■□□□ 1.74
DDX60Q8IY21 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 ESRRAP1-201ENST00000400596 1257 ntBASIC25.91■■□□□ 1.74
DDX60Q8IY21 LSM12P1-201ENST00000411836 588 ntBASIC25.91■■□□□ 1.74
DDX60Q8IY21 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 AC105020.6-201ENST00000621523 1217 ntBASIC25.91■■□□□ 1.74
DDX60Q8IY21 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 AC242852.2-201ENST00000615738 1807 ntBASIC25.91■■□□□ 1.74
DDX60Q8IY21 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DDX60Q8IY21 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
DDX60Q8IY21 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.9■■□□□ 1.74
DDX60Q8IY21 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.9■■□□□ 1.74
DDX60Q8IY21 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
DDX60Q8IY21 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.9■■□□□ 1.74
DDX60Q8IY21 PNMA6B-201ENST00000538162 1200 ntBASIC25.9■■□□□ 1.74
DDX60Q8IY21 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.9■■□□□ 1.74
DDX60Q8IY21 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
DDX60Q8IY21 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
DDX60Q8IY21 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
DDX60Q8IY21 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms