Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC71Q8IV32 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CCDC71Q8IV32 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC71Q8IV32 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 TPRG1LP1-201ENST00000598702 760 ntBASIC19.46■□□□□ 0.71
CCDC71Q8IV32 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC71Q8IV32 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 AC016769.1-201ENST00000409132 1010 ntBASIC19.45■□□□□ 0.7
CCDC71Q8IV32 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 AC137761.2-201ENST00000561729 223 ntBASIC19.45■□□□□ 0.7
CCDC71Q8IV32 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 AC145350.3-201ENST00000569033 163 ntBASIC19.45■□□□□ 0.7
CCDC71Q8IV32 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 AC080038.1-201ENST00000611274 1154 ntBASIC19.45■□□□□ 0.7
CCDC71Q8IV32 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC71Q8IV32 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms