Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1LQ86WJ1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC25.78■■□□□ 1.72
CHD1LQ86WJ1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CHD1LQ86WJ1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 LINC01521-201ENST00000504184 1943 ntBASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
CHD1LQ86WJ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 AC138907.5-202ENST00000569484 235 ntBASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.76■■□□□ 1.71
CHD1LQ86WJ1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.75■■□□□ 1.71
CHD1LQ86WJ1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 POU5F1P4-201ENST00000413175 1085 ntBASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 AC123595.1-201ENST00000440769 1046 ntBASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 AC008175.2-201ENST00000612840 297 ntBASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.74■■□□□ 1.71
CHD1LQ86WJ1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 TERF1P2-201ENST00000583350 1212 ntBASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC25.73■■□□□ 1.71
CHD1LQ86WJ1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1LQ86WJ1 AC092667.1-201ENST00000434301 2586 ntBASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 YBX1P1-201ENST00000445822 960 ntBASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CHD1LQ86WJ1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHD1LQ86WJ1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
CHD1LQ86WJ1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHD1LQ86WJ1 AC073314.1-201ENST00000568729 2216 ntBASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 AC010141.2-201ENST00000452426 721 ntBASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.7■■□□□ 1.7
CHD1LQ86WJ1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms