Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.92■□□□□ 0.62
ATG4DQ86TL0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 NTF6G-201ENST00000591094 616 ntBASIC18.91■□□□□ 0.62
ATG4DQ86TL0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATG4DQ86TL0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 PLK5-205ENST00000642079 1969 ntBASIC18.9■□□□□ 0.62
ATG4DQ86TL0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 AP001160.3-201ENST00000601484 763 ntBASIC18.9■□□□□ 0.62
ATG4DQ86TL0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 KRT16P2-201ENST00000414673 1423 ntBASIC18.9■□□□□ 0.62
ATG4DQ86TL0 AC004854.2-201ENST00000608450 1441 ntBASIC18.9■□□□□ 0.62
ATG4DQ86TL0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATG4DQ86TL0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ATG4DQ86TL0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ATG4DQ86TL0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATG4DQ86TL0 AC121338.2-201ENST00000622535 1744 ntBASIC18.88■□□□□ 0.61
ATG4DQ86TL0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 AC006128.1-201ENST00000624704 1661 ntBASIC18.88■□□□□ 0.61
ATG4DQ86TL0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
ATG4DQ86TL0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATG4DQ86TL0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms