Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 AC073210.2-201ENST00000430369 194 ntBASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 AL162412.1-201ENST00000567129 965 ntBASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 MIR4651-201ENST00000582622 73 ntBASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 AC010980.2-201ENST00000587099 1412 ntBASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BRD3OSQ6XYD6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 RNA5SP413-201ENST00000516373 109 ntBASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BRD3OSQ6XYD6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 AC091799.1-201ENST00000422823 811 ntBASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 AC092118.2-201ENST00000613495 667 ntBASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BRD3OSQ6XYD6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRD3OSQ6XYD6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRD3OSQ6XYD6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BRD3OSQ6XYD6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BRD3OSQ6XYD6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 TMEM191A-211ENST00000637163 1067 ntBASIC16.88■□□□□ 0.29
BRD3OSQ6XYD6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms