Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC079140.4-201ENST00000507448 529 ntBASIC23.55■■□□□ 1.36
SHC4Q6S5L8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHC4Q6S5L8 KRT87P-202ENST00000534226 1464 ntBASIC23.55■■□□□ 1.36
SHC4Q6S5L8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SHC4Q6S5L8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SHC4Q6S5L8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHC4Q6S5L8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
SHC4Q6S5L8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 AP004607.4-201ENST00000530158 1459 ntBASIC23.54■■□□□ 1.36
SHC4Q6S5L8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHC4Q6S5L8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.53■■□□□ 1.36
SHC4Q6S5L8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHC4Q6S5L8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SHC4Q6S5L8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SHC4Q6S5L8 AC027702.1-201ENST00000563810 1770 ntBASIC23.5■■□□□ 1.35
SHC4Q6S5L8 AC007225.1-201ENST00000566331 1836 ntBASIC23.49■■□□□ 1.35
SHC4Q6S5L8 GABARAPL3-202ENST00000624044 1851 ntBASIC23.49■■□□□ 1.35
SHC4Q6S5L8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 AC138907.5-202ENST00000569484 235 ntBASIC23.49■■□□□ 1.35
SHC4Q6S5L8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.49■■□□□ 1.35
SHC4Q6S5L8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SHC4Q6S5L8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms