Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CASC4Q6P4E1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.22■□□□□ 0.99
CASC4Q6P4E1 AL136967.2-201ENST00000623968 743 ntBASIC21.22■□□□□ 0.99
CASC4Q6P4E1 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.22■□□□□ 0.99
CASC4Q6P4E1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CASC4Q6P4E1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CASC4Q6P4E1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CASC4Q6P4E1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.2■□□□□ 0.99
CASC4Q6P4E1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CASC4Q6P4E1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 AL031432.3-201ENST00000607698 485 ntBASIC21.19■□□□□ 0.98
CASC4Q6P4E1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.19■□□□□ 0.98
CASC4Q6P4E1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CASC4Q6P4E1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 AIRN-201ENST00000601203 4374 ntBASIC21.18■□□□□ 0.98
CASC4Q6P4E1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CASC4Q6P4E1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.17■□□□□ 0.98
CASC4Q6P4E1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 AL139246.5-201ENST00000606645 996 ntBASIC21.16■□□□□ 0.98
CASC4Q6P4E1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CASC4Q6P4E1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms