Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL6Q6ICC9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RTL6Q6ICC9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL6Q6ICC9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL6Q6ICC9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 AC093787.1-201ENST00000450396 207 ntBASIC18.8■□□□□ 0.6
RTL6Q6ICC9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 OR10C1-204ENST00000622521 1039 ntBASIC18.8■□□□□ 0.6
RTL6Q6ICC9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL6Q6ICC9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 KRT16P2-201ENST00000414673 1423 ntBASIC18.79■□□□□ 0.6
RTL6Q6ICC9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 AC061975.6-201ENST00000579045 1553 ntBASIC18.79■□□□□ 0.6
RTL6Q6ICC9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 MKRN4P-201ENST00000444706 1521 ntBASIC18.79■□□□□ 0.6
RTL6Q6ICC9 AC080038.3-201ENST00000623346 1952 ntBASIC18.79■□□□□ 0.6
RTL6Q6ICC9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL6Q6ICC9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 RBM17P2-201ENST00000616397 1405 ntBASIC18.78■□□□□ 0.6
RTL6Q6ICC9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 MIPEPP3-201ENST00000412105 444 ntBASIC18.78■□□□□ 0.6
RTL6Q6ICC9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 AC016405.3-201ENST00000607710 860 ntBASIC18.78■□□□□ 0.6
RTL6Q6ICC9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 TMEM191A-211ENST00000637163 1067 ntBASIC18.78■□□□□ 0.6
RTL6Q6ICC9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL6Q6ICC9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 MIR4651-201ENST00000582622 73 ntBASIC18.77■□□□□ 0.6
RTL6Q6ICC9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTL6Q6ICC9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTL6Q6ICC9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RTL6Q6ICC9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
RTL6Q6ICC9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.77■□□□□ 0.59
RTL6Q6ICC9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 AL512625.2-201ENST00000417533 625 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms