Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 AC080038.1-201ENST00000611274 1154 ntBASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 AC011767.1-201ENST00000617410 1153 ntBASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 KRT16P2-201ENST00000414673 1423 ntBASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TTC39BQ5VTQ0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 Z98882.1-201ENST00000622160 2253 ntBASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 MFSD11-216ENST00000590393 1141 ntBASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 RARRES2P11-201ENST00000635158 484 ntBASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC39BQ5VTQ0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC39BQ5VTQ0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TTC39BQ5VTQ0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TTC39BQ5VTQ0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TTC39BQ5VTQ0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 AC073111.5-205ENST00000641717 521 ntBASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.64■■□□□ 1.05
TTC39BQ5VTQ0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms