Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LRIF1Q5T3J3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 AC020907.5-201ENST00000624372 1936 ntBASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRIF1Q5T3J3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRIF1Q5T3J3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 AC099791.1-201ENST00000416440 715 ntBASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIF1Q5T3J3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 TSPY26P-201ENST00000476365 1326 ntBASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 EEF1DP3-203ENST00000566025 782 ntBASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 AC008764.7-201ENST00000593779 1081 ntBASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.62■□□□□ 0.73
LRIF1Q5T3J3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms