Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
SNAPC4Q5SXM2 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC34.54■■■■□ 3.12
SNAPC4Q5SXM2 KRT18P68-201ENST00000392293 1000 ntBASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 PENK-204ENST00000518770 863 ntTSL 2 BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 AL353708.3-201ENST00000610272 989 ntBASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 AC105020.6-201ENST00000621523 1217 ntBASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
SNAPC4Q5SXM2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 AL023875.1-201ENST00000640777 796 ntBASIC34.52■■■■□ 3.12
SNAPC4Q5SXM2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC34.51■■■■□ 3.12
SNAPC4Q5SXM2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC34.51■■■■□ 3.12
SNAPC4Q5SXM2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
SNAPC4Q5SXM2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC34.51■■■■□ 3.12
SNAPC4Q5SXM2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 AC245052.3-201ENST00000450182 901 ntBASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC34.51■■■■□ 3.11
SNAPC4Q5SXM2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC34.5■■■■□ 3.11
SNAPC4Q5SXM2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 AC137767.1-201ENST00000602918 1920 ntBASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
SNAPC4Q5SXM2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 AL135905.2-201ENST00000584934 1404 ntBASIC34.48■■■■□ 3.11
SNAPC4Q5SXM2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 AP001412.1-201ENST00000608405 714 ntBASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 CYP21A1P-202ENST00000354927 1481 ntBASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
SNAPC4Q5SXM2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 SAPCD2P1-201ENST00000395413 1184 ntBASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC34.46■■■■□ 3.11
SNAPC4Q5SXM2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC34.45■■■■□ 3.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms