Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.67■□□□□ 0.74
RUNDC3AQ59EK9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 UNC93B3-201ENST00000308076 687 ntBASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 IGHV3-19-201ENST00000521488 291 ntBASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 AC126544.1-201ENST00000580842 1059 ntBASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 AC020907.5-201ENST00000624372 1936 ntBASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RUNDC3AQ59EK9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RUNDC3AQ59EK9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RUNDC3AQ59EK9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
RUNDC3AQ59EK9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RUNDC3AQ59EK9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 AC005224.4-201ENST00000583262 1652 ntBASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RUNDC3AQ59EK9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 AL136116.3-201ENST00000402907 1138 ntBASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RUNDC3AQ59EK9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RUNDC3AQ59EK9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms