Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 ECM11YDR446W 909 nt1.84□□□□□ -2.11
HRD1Q08109 YER147C-AYER147C-A 411 nt1.84□□□□□ -2.11
HRD1Q08109 TWF1YGR080W 999 nt1.84□□□□□ -2.11
HRD1Q08109 PCL7YIL050W 858 nt1.84□□□□□ -2.11
HRD1Q08109 PAU14YIL176C 363 nt1.84□□□□□ -2.11
HRD1Q08109 PAU1YJL223C 363 nt1.84□□□□□ -2.11
HRD1Q08109 YAL059C-AYAL059C-A 423 nt1.84□□□□□ -2.11
HRD1Q08109 PAU8YAL068C 363 nt1.84□□□□□ -2.11
HRD1Q08109 PRM6YML047C 1059 nt1.84□□□□□ -2.11
HRD1Q08109 IGO1YNL157W 507 nt1.84□□□□□ -2.11
HRD1Q08109 YNL276CYNL276C 396 nt1.84□□□□□ -2.11
HRD1Q08109 PAU20YOL161C 363 nt1.84□□□□□ -2.11
HRD1Q08109 YSA1YBR111C 696 nt1.84□□□□□ -2.11
HRD1Q08109 APC5YOR249C 2058 nt1.84□□□□□ -2.12
HRD1Q08109 SDC25YLL016W 3147 nt1.84□□□□□ -2.12
HRD1Q08109 YFR016CYFR016C 3702 nt1.83□□□□□ -2.12
HRD1Q08109 UBP2YOR124C 3819 nt1.83□□□□□ -2.12
HRD1Q08109 NHP10YDL002C 612 nt1.83□□□□□ -2.12
HRD1Q08109 TSC13YDL015C 933 nt1.83□□□□□ -2.12
HRD1Q08109 VPS41YDR080W 2979 nt1.83□□□□□ -2.12
HRD1Q08109 YNL035CYNL035C 1170 nt1.83□□□□□ -2.12
HRD1Q08109 ATG19YOL082W 1248 nt1.83□□□□□ -2.12
HRD1Q08109 CRS5YOR031W 210 nt1.83□□□□□ -2.12
HRD1Q08109 IAH1YOR126C 717 nt1.83□□□□□ -2.12
HRD1Q08109 SSP2YOR242C 1116 nt1.83□□□□□ -2.12
HRD1Q08109 SRL1YOR247W 633 nt1.83□□□□□ -2.12
HRD1Q08109 ALY1YKR021W 2748 nt1.83□□□□□ -2.12
HRD1Q08109 PSP1YDR505C 2526 nt1.83□□□□□ -2.12
HRD1Q08109 DBF20YPR111W 1695 nt1.83□□□□□ -2.12
HRD1Q08109 SLY41YOR307C 1362 nt1.83□□□□□ -2.12
HRD1Q08109 APL5YPL195W 2799 nt1.82□□□□□ -2.12
HRD1Q08109 VTC3YPL019C 2508 nt1.82□□□□□ -2.12
HRD1Q08109 ARI1YGL157W 1044 nt1.82□□□□□ -2.12
HRD1Q08109 YIR036W-AYIR036W-A 402 nt1.82□□□□□ -2.12
HRD1Q08109 YJL169WYJL169W 369 nt1.82□□□□□ -2.12
HRD1Q08109 SRL3YKR091W 741 nt1.82□□□□□ -2.12
HRD1Q08109 YBL055CYBL055C 1257 nt1.82□□□□□ -2.12
HRD1Q08109 PDR17YNL264C 1053 nt1.82□□□□□ -2.12
HRD1Q08109 AIM4YBR194W 372 nt1.82□□□□□ -2.12
HRD1Q08109 CLN3YAL040C 1743 nt1.82□□□□□ -2.12
HRD1Q08109 SAS4YDR181C 1446 nt1.82□□□□□ -2.12
HRD1Q08109 UTP22YGR090W 3714 nt1.81□□□□□ -2.12
HRD1Q08109 KOG1YHR186C 4674 nt1.81□□□□□ -2.12
HRD1Q08109 POL4YCR014C 1749 nt1.81□□□□□ -2.12
HRD1Q08109 COBQ0105 1158 nt1.81□□□□□ -2.12
HRD1Q08109 YFR010W-AYFR010W-A 189 nt1.81□□□□□ -2.12
HRD1Q08109 ARC19YKL013C 516 nt1.81□□□□□ -2.12
HRD1Q08109 YKL070WYKL070W 510 nt1.81□□□□□ -2.12
HRD1Q08109 HRT3YLR097C 1035 nt1.81□□□□□ -2.12
HRD1Q08109 ADI1YMR009W 540 nt1.81□□□□□ -2.12
HRD1Q08109 YOR203WYOR203W 354 nt1.81□□□□□ -2.12
HRD1Q08109 DGK1YOR311C 873 nt1.81□□□□□ -2.12
HRD1Q08109 GIP3YPL137C 3831 nt1.81□□□□□ -2.12
HRD1Q08109 TFB1YDR311W 1929 nt1.81□□□□□ -2.12
HRD1Q08109 YMR045CYMR045C 5268 nt1.81□□□□□ -2.12
HRD1Q08109 ART10YLR392C 1557 nt1.81□□□□□ -2.12
HRD1Q08109 snR57snR57 88 nt1.8□□□□□ -2.12
HRD1Q08109 YDL026WYDL026W 312 nt1.8□□□□□ -2.12
HRD1Q08109 YDR203WYDR203W 318 nt1.8□□□□□ -2.12
HRD1Q08109 TCA17YEL048C 459 nt1.8□□□□□ -2.12
HRD1Q08109 YGL101WYGL101W 648 nt1.8□□□□□ -2.12
HRD1Q08109 UPF3YGR072W 1164 nt1.8□□□□□ -2.12
HRD1Q08109 SRN2YLR119W 642 nt1.8□□□□□ -2.12
HRD1Q08109 RPS17AYML024W 411 nt1.8□□□□□ -2.12
HRD1Q08109 RSA1YPL193W 1146 nt1.8□□□□□ -2.12
HRD1Q08109 URB2YJR041C 3525 nt1.8□□□□□ -2.12
HRD1Q08109 BIT61YJL058C 1632 nt1.8□□□□□ -2.12
HRD1Q08109 INO80YGL150C 4470 nt1.79□□□□□ -2.12
HRD1Q08109 HLR1YDR528W 1272 nt1.79□□□□□ -2.12
HRD1Q08109 RPL36AYMR194W 303 nt1.79□□□□□ -2.12
HRD1Q08109 YPR074W-AYPR074W-A 171 nt1.79□□□□□ -2.12
HRD1Q08109 NUF2YOL069W 1356 nt1.79□□□□□ -2.12
HRD1Q08109 RGA2YDR379W 3030 nt1.79□□□□□ -2.12
HRD1Q08109 PSK2YOL045W 3306 nt1.78□□□□□ -2.12
HRD1Q08109 INP51YIL002C 2841 nt1.78□□□□□ -2.12
HRD1Q08109 SCH9YHR205W 2475 nt1.78□□□□□ -2.12
HRD1Q08109 SSE1YPL106C 2082 nt1.78□□□□□ -2.12
HRD1Q08109 PEX5YDR244W 1839 nt1.78□□□□□ -2.12
HRD1Q08109 IRC20YLR247C 4671 nt1.78□□□□□ -2.12
HRD1Q08109 GCN4YEL009C 846 nt1.78□□□□□ -2.12
HRD1Q08109 VMA10YHR039C-A 345 nt1.78□□□□□ -2.12
HRD1Q08109 YAP5YIR018W 738 nt1.78□□□□□ -2.12
HRD1Q08109 RPC17YJL011C 486 nt1.78□□□□□ -2.12
HRD1Q08109 YJL202CYJL202C 348 nt1.78□□□□□ -2.12
HRD1Q08109 PSY1YKL076C 384 nt1.78□□□□□ -2.12
HRD1Q08109 LIP2YLR239C 987 nt1.78□□□□□ -2.12
HRD1Q08109 YML047W-AYML047W-A 366 nt1.78□□□□□ -2.12
HRD1Q08109 FIG1YBR040W 897 nt1.78□□□□□ -2.12
HRD1Q08109 RPL36BYPL249C-A 303 nt1.78□□□□□ -2.12
HRD1Q08109 MSS18YPR134W 807 nt1.78□□□□□ -2.12
HRD1Q08109 YJR061WYJR061W 2808 nt1.78□□□□□ -2.12
HRD1Q08109 UBR1YGR184C 5853 nt1.78□□□□□ -2.12
HRD1Q08109 YDR320W-BYDR320W-B 138 nt1.77□□□□□ -2.13
HRD1Q08109 ISC10YER180C 804 nt1.77□□□□□ -2.13
HRD1Q08109 MPO1YGL010W 525 nt1.77□□□□□ -2.13
HRD1Q08109 DUO1YGL061C 744 nt1.77□□□□□ -2.13
HRD1Q08109 MMF1YIL051C 438 nt1.77□□□□□ -2.13
HRD1Q08109 VPS51YKR020W 495 nt1.77□□□□□ -2.13
HRD1Q08109 YKR051WYKR051W 1257 nt1.77□□□□□ -2.13
HRD1Q08109 DGR1YNL130C-A 147 nt1.77□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms