Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 YLR400WYLR400W 474 nt1.31□□□□□ -2.2
LSM6Q06406 TIF34YMR146C 1044 nt1.31□□□□□ -2.2
LSM6Q06406 YIM2YMR151W 438 nt1.31□□□□□ -2.2
LSM6Q06406 CRS5YOR031W 210 nt1.31□□□□□ -2.2
LSM6Q06406 HUA2YOR284W 732 nt1.31□□□□□ -2.2
LSM6Q06406 YOR331CYOR331C 558 nt1.31□□□□□ -2.2
LSM6Q06406 AIM4YBR194W 372 nt1.31□□□□□ -2.2
LSM6Q06406 HMS1YOR032C 1305 nt1.31□□□□□ -2.2
LSM6Q06406 PDR8YLR266C 2106 nt1.31□□□□□ -2.2
LSM6Q06406 DNA2YHR164C 4569 nt1.31□□□□□ -2.2
LSM6Q06406 MON1YGL124C 1935 nt1.3□□□□□ -2.2
LSM6Q06406 IST2YBR086C 2841 nt1.3□□□□□ -2.2
LSM6Q06406 VPS8YAL002W 3825 nt1.3□□□□□ -2.2
LSM6Q06406 YKL069WYKL069W 543 nt1.3□□□□□ -2.2
LSM6Q06406 YKL071WYKL071W 771 nt1.3□□□□□ -2.2
LSM6Q06406 CCW14YLR390W-A 717 nt1.3□□□□□ -2.2
LSM6Q06406 PFK27YOL136C 1194 nt1.3□□□□□ -2.2
LSM6Q06406 TRM82YDR165W 1335 nt1.3□□□□□ -2.2
LSM6Q06406 YIL092WYIL092W 1902 nt1.3□□□□□ -2.2
LSM6Q06406 SSY1YDR160W 2559 nt1.3□□□□□ -2.2
LSM6Q06406 SLM1YIL105C 2061 nt1.3□□□□□ -2.2
LSM6Q06406 PKH3YDR466W 2697 nt1.3□□□□□ -2.2
LSM6Q06406 MGA2YIR033W 3342 nt1.3□□□□□ -2.2
LSM6Q06406 APL5YPL195W 2799 nt1.3□□□□□ -2.2
LSM6Q06406 RKM1YPL208W 1752 nt1.29□□□□□ -2.2
LSM6Q06406 MSS2YDL107W 1056 nt1.29□□□□□ -2.2
LSM6Q06406 SHU2YDR078C 672 nt1.29□□□□□ -2.2
LSM6Q06406 VPH2YKL119C 648 nt1.29□□□□□ -2.2
LSM6Q06406 SYM1YLR251W 594 nt1.29□□□□□ -2.2
LSM6Q06406 VPS38YLR360W 1320 nt1.29□□□□□ -2.2
LSM6Q06406 AVT5YBL089W 1380 nt1.29□□□□□ -2.2
LSM6Q06406 SPO77YLR341W 1434 nt1.29□□□□□ -2.2
LSM6Q06406 ATG9YDL149W 2994 nt1.29□□□□□ -2.2
LSM6Q06406 YFH7YFR007W 1062 nt1.28□□□□□ -2.2
LSM6Q06406 YIL058WYIL058W 285 nt1.28□□□□□ -2.2
LSM6Q06406 SPC3YLR066W 555 nt1.28□□□□□ -2.2
LSM6Q06406 IPT1YDR072C 1584 nt1.28□□□□□ -2.2
LSM6Q06406 CLN2YPL256C 1638 nt1.27□□□□□ -2.21
LSM6Q06406 PKP2YGL059W 1476 nt1.27□□□□□ -2.21
LSM6Q06406 RNH202YDR279W 1053 nt1.27□□□□□ -2.21
LSM6Q06406 SEC4YFL005W 648 nt1.27□□□□□ -2.21
LSM6Q06406 YOR342CYOR342C 960 nt1.27□□□□□ -2.21
LSM6Q06406 BIT61YJL058C 1632 nt1.26□□□□□ -2.21
LSM6Q06406 HSL1YKL101W 4557 nt1.26□□□□□ -2.21
LSM6Q06406 BRE5YNR051C 1548 nt1.26□□□□□ -2.21
LSM6Q06406 PRE1YER012W 597 nt1.26□□□□□ -2.21
LSM6Q06406 YJL169WYJL169W 369 nt1.26□□□□□ -2.21
LSM6Q06406 HRI1YLR301W 735 nt1.26□□□□□ -2.21
LSM6Q06406 RPS22BYLR367W 393 nt1.26□□□□□ -2.21
LSM6Q06406 YML090WYML090W 387 nt1.26□□□□□ -2.21
LSM6Q06406 MRPL44YMR225C 297 nt1.26□□□□□ -2.21
LSM6Q06406 MRPL17YNL252C 846 nt1.26□□□□□ -2.21
LSM6Q06406 RFM1YOR279C 933 nt1.26□□□□□ -2.21
LSM6Q06406 YOR387CYOR387C 621 nt1.26□□□□□ -2.21
LSM6Q06406 TFB1YDR311W 1929 nt1.26□□□□□ -2.21
LSM6Q06406 IRA1YBR140C 9279 nt1.26□□□□□ -2.21
LSM6Q06406 YKR015CYKR015C 1707 nt1.26□□□□□ -2.21
LSM6Q06406 YBP1YBR216C 2025 nt1.25□□□□□ -2.21
LSM6Q06406 APC11YDL008W 498 nt1.25□□□□□ -2.21
LSM6Q06406 YER068C-AYER068C-A 432 nt1.25□□□□□ -2.21
LSM6Q06406 DDI2YFL061W 678 nt1.25□□□□□ -2.21
LSM6Q06406 YGR226CYGR226C 210 nt1.25□□□□□ -2.21
LSM6Q06406 PSY1YKL076C 384 nt1.25□□□□□ -2.21
LSM6Q06406 SIP18YMR175W 240 nt1.25□□□□□ -2.21
LSM6Q06406 PIN3YPR154W 648 nt1.25□□□□□ -2.21
LSM6Q06406 SSP1YHR184W 1716 nt1.25□□□□□ -2.21
LSM6Q06406 SBE22YHR103W 2559 nt1.25□□□□□ -2.21
LSM6Q06406 DSS1YMR287C 2910 nt1.25□□□□□ -2.21
LSM6Q06406 SLN1YIL147C 3663 nt1.25□□□□□ -2.21
LSM6Q06406 REV1YOR346W 2958 nt1.24□□□□□ -2.21
LSM6Q06406 VPS9YML097C 1356 nt1.24□□□□□ -2.21
LSM6Q06406 CBF2YGR140W 2871 nt1.24□□□□□ -2.21
LSM6Q06406 PST1YDR055W 1335 nt1.24□□□□□ -2.21
LSM6Q06406 YDL241WYDL241W 372 nt1.24□□□□□ -2.21
LSM6Q06406 CTH1YDR151C 978 nt1.24□□□□□ -2.21
LSM6Q06406 YGL069CYGL069C 465 nt1.24□□□□□ -2.21
LSM6Q06406 YLR290CYLR290C 834 nt1.24□□□□□ -2.21
LSM6Q06406 LSM2YBL026W 288 nt1.24□□□□□ -2.21
LSM6Q06406 SSP2YOR242C 1116 nt1.24□□□□□ -2.21
LSM6Q06406 LTP1YPR073C 486 nt1.24□□□□□ -2.21
LSM6Q06406 YBR174CYBR174C 315 nt1.24□□□□□ -2.21
LSM6Q06406 YOR093CYOR093C 4947 nt1.24□□□□□ -2.21
LSM6Q06406 YJL016WYJL016W 1686 nt1.23□□□□□ -2.21
LSM6Q06406 POM152YMR129W 4014 nt1.23□□□□□ -2.21
LSM6Q06406 STD1YOR047C 1335 nt1.23□□□□□ -2.21
LSM6Q06406 IZH1YDR492W 951 nt1.23□□□□□ -2.21
LSM6Q06406 CAP1YKL007W 807 nt1.23□□□□□ -2.21
LSM6Q06406 RDN58-1RDN58-1 158 nt1.23□□□□□ -2.21
LSM6Q06406 RDN58-2RDN58-2 158 nt1.23□□□□□ -2.21
LSM6Q06406 YLR444CYLR444C 303 nt1.23□□□□□ -2.21
LSM6Q06406 DSE3YOR264W 1293 nt1.23□□□□□ -2.21
LSM6Q06406 SAR1YPL218W 573 nt1.23□□□□□ -2.21
LSM6Q06406 APC2YLR127C 2562 nt1.23□□□□□ -2.21
LSM6Q06406 RTG3YBL103C 1461 nt1.23□□□□□ -2.21
LSM6Q06406 CCH1YGR217W 6120 nt1.23□□□□□ -2.21
LSM6Q06406 HSH155YMR288W 2916 nt1.22□□□□□ -2.21
LSM6Q06406 IRC4YDR540C 540 nt1.22□□□□□ -2.21
LSM6Q06406 AAD16YFL057C 459 nt1.22□□□□□ -2.21
LSM6Q06406 YGL138CYGL138C 1038 nt1.22□□□□□ -2.21
LSM6Q06406 TAN1YGL232W 870 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms