Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YOL166CYOL166C 339 nt1.93□□□□□ -2.1
RKR1Q04781 TOP2YNL088W 4287 nt1.92□□□□□ -2.1
RKR1Q04781 PLP1YDR183W 693 nt1.92□□□□□ -2.1
RKR1Q04781 YIL142C-AYIL142C-A 333 nt1.92□□□□□ -2.1
RKR1Q04781 MSN5YDR335W 3675 nt1.91□□□□□ -2.1
RKR1Q04781 YLR422WYLR422W 5799 nt1.91□□□□□ -2.1
RKR1Q04781 REG1YDR028C 3045 nt1.91□□□□□ -2.1
RKR1Q04781 HIT1YJR055W 495 nt1.91□□□□□ -2.1
RKR1Q04781 SPC3YLR066W 555 nt1.91□□□□□ -2.1
RKR1Q04781 RRP14YKL082C 1305 nt1.91□□□□□ -2.1
RKR1Q04781 NUP157YER105C 4176 nt1.91□□□□□ -2.1
RKR1Q04781 SPO22YIL073C 2928 nt1.91□□□□□ -2.1
RKR1Q04781 MON2YNL297C 4911 nt1.91□□□□□ -2.1
RKR1Q04781 YHR097CYHR097C 1101 nt1.9□□□□□ -2.1
RKR1Q04781 LSM1YJL124C 519 nt1.9□□□□□ -2.1
RKR1Q04781 YML053CYML053C 639 nt1.9□□□□□ -2.1
RKR1Q04781 RDS2YPL133C 1341 nt1.9□□□□□ -2.11
RKR1Q04781 INP51YIL002C 2841 nt1.9□□□□□ -2.11
RKR1Q04781 MRP10YDL045W-A 288 nt1.89□□□□□ -2.11
RKR1Q04781 YDR461C-AYDR461C-A 243 nt1.89□□□□□ -2.11
RKR1Q04781 YOR034C-AYOR034C-A 243 nt1.89□□□□□ -2.11
RKR1Q04781 RPL33BYOR234C 324 nt1.89□□□□□ -2.11
RKR1Q04781 PBI1YPL272C 1554 nt1.89□□□□□ -2.11
RKR1Q04781 YDR034C-DYDR034C-D 5313 nt1.89□□□□□ -2.11
RKR1Q04781 YLR410W-BYLR410W-B 5313 nt1.89□□□□□ -2.11
RKR1Q04781 MIG2YGL209W 1149 nt1.89□□□□□ -2.11
RKR1Q04781 KCS1YDR017C 3153 nt1.89□□□□□ -2.11
RKR1Q04781 SRO9YCL037C 1305 nt1.89□□□□□ -2.11
RKR1Q04781 RRP42YDL111C 798 nt1.88□□□□□ -2.11
RKR1Q04781 YGL069CYGL069C 465 nt1.88□□□□□ -2.11
RKR1Q04781 ARR2YPR200C 393 nt1.88□□□□□ -2.11
RKR1Q04781 IRA2YOL081W 9240 nt1.87□□□□□ -2.11
RKR1Q04781 YOR192C-BYOR192C-B 5313 nt1.87□□□□□ -2.11
RKR1Q04781 DOP1YDR141C 5097 nt1.87□□□□□ -2.11
RKR1Q04781 SEC3YER008C 4011 nt1.87□□□□□ -2.11
RKR1Q04781 YNL165WYNL165W 1221 nt1.86□□□□□ -2.11
RKR1Q04781 YOL162WYOL162W 648 nt1.86□□□□□ -2.11
RKR1Q04781 YOR289WYOR289W 756 nt1.86□□□□□ -2.11
RKR1Q04781 YCR087C-AYCR087C-A 462 nt1.85□□□□□ -2.11
RKR1Q04781 YIL166CYIL166C 1629 nt1.85□□□□□ -2.11
RKR1Q04781 CDC25YLR310C 4770 nt1.85□□□□□ -2.11
RKR1Q04781 NRG1YDR043C 696 nt1.85□□□□□ -2.11
RKR1Q04781 SPO13YHR014W 876 nt1.85□□□□□ -2.11
RKR1Q04781 LIP2YLR239C 987 nt1.85□□□□□ -2.11
RKR1Q04781 COG2YGR120C 789 nt1.84□□□□□ -2.12
RKR1Q04781 YLR154W-AYLR154W-A 186 nt1.84□□□□□ -2.12
RKR1Q04781 NDL1YLR254C 570 nt1.84□□□□□ -2.12
RKR1Q04781 YMR045CYMR045C 5268 nt1.84□□□□□ -2.12
RKR1Q04781 YHR214C-CYHR214C-C 1437 nt1.83□□□□□ -2.12
RKR1Q04781 CDC53YDL132W 2448 nt1.83□□□□□ -2.12
RKR1Q04781 GAS2YLR343W 1668 nt1.83□□□□□ -2.12
RKR1Q04781 YMR321CYMR321C 318 nt1.83□□□□□ -2.12
RKR1Q04781 YDR115WYDR115W 318 nt1.82□□□□□ -2.12
RKR1Q04781 HPA3YEL066W 540 nt1.82□□□□□ -2.12
RKR1Q04781 YER085CYER085C 522 nt1.82□□□□□ -2.12
RKR1Q04781 YGL117WYGL117W 798 nt1.82□□□□□ -2.12
RKR1Q04781 PAM16YJL104W 450 nt1.82□□□□□ -2.12
RKR1Q04781 VPS72YDR485C 2388 nt1.82□□□□□ -2.12
RKR1Q04781 SRG1SRG1 551 nt1.81□□□□□ -2.12
RKR1Q04781 UTP6YDR449C 1323 nt1.81□□□□□ -2.12
RKR1Q04781 NAM7YMR080C 2916 nt1.8□□□□□ -2.12
RKR1Q04781 PRP16YKR086W 3216 nt1.8□□□□□ -2.12
RKR1Q04781 KXD1YGL079W 657 nt1.8□□□□□ -2.12
RKR1Q04781 VPH2YKL119C 648 nt1.79□□□□□ -2.12
RKR1Q04781 IOC4YMR044W 1428 nt1.79□□□□□ -2.12
RKR1Q04781 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
RKR1Q04781 YPR078CYPR078C 1119 nt1.79□□□□□ -2.12
RKR1Q04781 VMR1YHL035C 4779 nt1.79□□□□□ -2.12
RKR1Q04781 SPT14YPL175W 1359 nt1.79□□□□□ -2.12
RKR1Q04781 YOR093CYOR093C 4947 nt1.79□□□□□ -2.12
RKR1Q04781 VPS38YLR360W 1320 nt1.78□□□□□ -2.12
RKR1Q04781 NPR1YNL183C 2373 nt1.78□□□□□ -2.12
RKR1Q04781 DBP5YOR046C 1449 nt1.78□□□□□ -2.12
RKR1Q04781 HCH1YNL281W 462 nt1.78□□□□□ -2.12
RKR1Q04781 MBA1YBR185C 837 nt1.78□□□□□ -2.12
RKR1Q04781 DUF1YOL087C 3351 nt1.77□□□□□ -2.13
RKR1Q04781 PMI40YER003C 1290 nt1.77□□□□□ -2.13
RKR1Q04781 GLG2YJL137C 1143 nt1.77□□□□□ -2.13
RKR1Q04781 RPL20AYMR242C 519 nt1.77□□□□□ -2.13
RKR1Q04781 RLP7YNL002C 969 nt1.77□□□□□ -2.13
RKR1Q04781 SMP3YOR149C 1551 nt1.77□□□□□ -2.13
RKR1Q04781 RPN9YDR427W 1182 nt1.76□□□□□ -2.13
RKR1Q04781 SPP382YLR424W 2127 nt1.76□□□□□ -2.13
RKR1Q04781 NRP1YDL167C 2160 nt1.76□□□□□ -2.13
RKR1Q04781 GCN2YDR283C 4980 nt1.76□□□□□ -2.13
RKR1Q04781 FMP16YDR070C 282 nt1.76□□□□□ -2.13
RKR1Q04781 RAV2YDR202C 1056 nt1.76□□□□□ -2.13
RKR1Q04781 YEL032C-AYEL032C-A 162 nt1.76□□□□□ -2.13
RKR1Q04781 OST5YGL226C-A 261 nt1.76□□□□□ -2.13
RKR1Q04781 UBP16YPL072W 1500 nt1.75□□□□□ -2.13
RKR1Q04781 MRPL6YHR147C 645 nt1.75□□□□□ -2.13
RKR1Q04781 SDP1YIL113W 630 nt1.75□□□□□ -2.13
RKR1Q04781 HDA2YDR295C 2025 nt1.75□□□□□ -2.13
RKR1Q04781 MAD1YGL086W 2250 nt1.75□□□□□ -2.13
RKR1Q04781 SMI1YGR229C 1518 nt1.74□□□□□ -2.13
RKR1Q04781 NOP6YDL213C 678 nt1.73□□□□□ -2.13
RKR1Q04781 JJJ3YJR097W 519 nt1.73□□□□□ -2.13
RKR1Q04781 YLR366WYLR366W 306 nt1.73□□□□□ -2.13
RKR1Q04781 CDC73YLR418C 1182 nt1.73□□□□□ -2.13
RKR1Q04781 RPS18AYDR450W 441 nt1.72□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms