Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.32■□□□□ 0.2
CFHR3Q02985 AC245052.3-201ENST00000450182 901 ntBASIC16.32■□□□□ 0.2
CFHR3Q02985 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.32■□□□□ 0.2
CFHR3Q02985 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.32■□□□□ 0.2
CFHR3Q02985 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 AC005181.1-201ENST00000604782 1256 ntBASIC16.32■□□□□ 0.2
CFHR3Q02985 AL050303.2-201ENST00000619798 666 ntBASIC16.32■□□□□ 0.2
CFHR3Q02985 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.32■□□□□ 0.2
CFHR3Q02985 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CFHR3Q02985 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CFHR3Q02985 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CFHR3Q02985 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.31■□□□□ 0.2
CFHR3Q02985 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
CFHR3Q02985 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.31■□□□□ 0.2
CFHR3Q02985 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.31■□□□□ 0.2
CFHR3Q02985 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CFHR3Q02985 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.31■□□□□ 0.2
CFHR3Q02985 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CFHR3Q02985 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.31■□□□□ 0.2
CFHR3Q02985 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.31■□□□□ 0.2
CFHR3Q02985 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 AC068338.2-201ENST00000563278 1430 ntBASIC16.3■□□□□ 0.2
CFHR3Q02985 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CFHR3Q02985 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.3■□□□□ 0.2
CFHR3Q02985 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CFHR3Q02985 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.3■□□□□ 0.2
CFHR3Q02985 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 AC006970.2-201ENST00000450065 779 ntBASIC16.3■□□□□ 0.2
CFHR3Q02985 AL162412.1-201ENST00000567129 965 ntBASIC16.3■□□□□ 0.2
CFHR3Q02985 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 Z98882.1-201ENST00000622160 2253 ntBASIC16.3■□□□□ 0.2
CFHR3Q02985 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CFHR3Q02985 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CFHR3Q02985 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.29■□□□□ 0.2
CFHR3Q02985 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CFHR3Q02985 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.29■□□□□ 0.2
CFHR3Q02985 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.29■□□□□ 0.2
CFHR3Q02985 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CFHR3Q02985 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 AC091799.1-201ENST00000422823 811 ntBASIC16.29■□□□□ 0.2
CFHR3Q02985 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.29■□□□□ 0.2
CFHR3Q02985 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.29■□□□□ 0.2
CFHR3Q02985 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CFHR3Q02985 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.29■□□□□ 0.2
CFHR3Q02985 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CFHR3Q02985 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CFHR3Q02985 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
CFHR3Q02985 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
CFHR3Q02985 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CFHR3Q02985 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CFHR3Q02985 CYP2T1P-201ENST00000432607 1285 ntBASIC16.28■□□□□ 0.2
CFHR3Q02985 NCF1B-203ENST00000435988 1254 ntBASIC16.28■□□□□ 0.2
CFHR3Q02985 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.28■□□□□ 0.2
CFHR3Q02985 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.28■□□□□ 0.2
CFHR3Q02985 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.28■□□□□ 0.2
CFHR3Q02985 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CFHR3Q02985 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms