Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CKS1BP61024 AC010542.4-201ENST00000563151 1910 ntBASIC14.49□□□□□ -0.09
CKS1BP61024 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.49□□□□□ -0.09
CKS1BP61024 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS1BP61024 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS1BP61024 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS1BP61024 SENP5-202ENST00000419026 973 ntTSL 3 BASIC14.49□□□□□ -0.09
CKS1BP61024 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC14.49□□□□□ -0.09
CKS1BP61024 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CKS1BP61024 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CKS1BP61024 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS1BP61024 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.49□□□□□ -0.09
CKS1BP61024 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS1BP61024 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS1BP61024 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS1BP61024 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS1BP61024 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CKS1BP61024 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS1BP61024 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 AC005082.1-201ENST00000413042 2259 ntBASIC14.48□□□□□ -0.09
CKS1BP61024 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CKS1BP61024 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS1BP61024 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CKS1BP61024 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CKS1BP61024 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS1BP61024 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS1BP61024 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CKS1BP61024 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CKS1BP61024 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS1BP61024 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS1BP61024 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 AL033527.3-201ENST00000566366 1196 ntBASIC14.47□□□□□ -0.09
CKS1BP61024 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CKS1BP61024 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.47□□□□□ -0.09
CKS1BP61024 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CKS1BP61024 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CKS1BP61024 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS1BP61024 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS1BP61024 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS1BP61024 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CKS1BP61024 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS1BP61024 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CKS1BP61024 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS1BP61024 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.46□□□□□ -0.09
CKS1BP61024 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.46□□□□□ -0.09
CKS1BP61024 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.46□□□□□ -0.09
CKS1BP61024 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.46□□□□□ -0.09
CKS1BP61024 AC103834.1-201ENST00000520383 144 ntBASIC14.46□□□□□ -0.09
CKS1BP61024 AC020916.1-201ENST00000587762 1774 ntBASIC14.46□□□□□ -0.09
CKS1BP61024 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.46□□□□□ -0.09
CKS1BP61024 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CKS1BP61024 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKS1BP61024 AC244015.2-201ENST00000616358 1861 ntBASIC14.46□□□□□ -0.1
CKS1BP61024 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms