Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN20P56880 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN20P56880 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.07■□□□□ 0.64
CLDN20P56880 AP001160.3-201ENST00000601484 763 ntBASIC19.07■□□□□ 0.64
CLDN20P56880 AL137784.2-201ENST00000607332 1000 ntBASIC19.07■□□□□ 0.64
CLDN20P56880 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN20P56880 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN20P56880 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN20P56880 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.07■□□□□ 0.64
CLDN20P56880 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN20P56880 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN20P56880 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN20P56880 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN20P56880 AC016769.1-201ENST00000409132 1010 ntBASIC19.06■□□□□ 0.64
CLDN20P56880 AC004911.1-201ENST00000416316 871 ntBASIC19.06■□□□□ 0.64
CLDN20P56880 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN20P56880 AC006015.1-201ENST00000429970 570 ntBASIC19.06■□□□□ 0.64
CLDN20P56880 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN20P56880 AC053503.5-201ENST00000601508 636 ntBASIC19.06■□□□□ 0.64
CLDN20P56880 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN20P56880 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN20P56880 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN20P56880 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN20P56880 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLDN20P56880 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN20P56880 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLDN20P56880 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN20P56880 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 AC138907.5-202ENST00000569484 235 ntBASIC19.05■□□□□ 0.64
CLDN20P56880 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLDN20P56880 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLDN20P56880 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN20P56880 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN20P56880 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN20P56880 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN20P56880 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLDN20P56880 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN20P56880 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CLDN20P56880 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN20P56880 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN20P56880 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLDN20P56880 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN20P56880 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 LINC01521-201ENST00000504184 1943 ntBASIC19.04■□□□□ 0.64
CLDN20P56880 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN20P56880 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 AC010141.2-201ENST00000452426 721 ntBASIC19.03■□□□□ 0.64
CLDN20P56880 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN20P56880 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.03■□□□□ 0.64
CLDN20P56880 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.03■□□□□ 0.64
CLDN20P56880 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
CLDN20P56880 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLDN20P56880 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CLDN20P56880 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.02■□□□□ 0.64
CLDN20P56880 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLDN20P56880 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms