Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN18P56856 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN18P56856 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN18P56856 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN18P56856 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN18P56856 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN18P56856 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN18P56856 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN18P56856 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN18P56856 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN18P56856 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.67■□□□□ 0.58
CLDN18P56856 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CLDN18P56856 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLDN18P56856 AC016405.3-201ENST00000607710 860 ntBASIC18.67■□□□□ 0.58
CLDN18P56856 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.67■□□□□ 0.58
CLDN18P56856 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.67■□□□□ 0.58
CLDN18P56856 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLDN18P56856 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 SLC29A4P1-201ENST00000398760 971 ntBASIC18.66■□□□□ 0.58
CLDN18P56856 AL512625.2-201ENST00000417533 625 ntBASIC18.66■□□□□ 0.58
CLDN18P56856 AC093787.1-201ENST00000450396 207 ntBASIC18.66■□□□□ 0.58
CLDN18P56856 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.66■□□□□ 0.58
CLDN18P56856 RARRES2P4-201ENST00000514074 484 ntBASIC18.66■□□□□ 0.58
CLDN18P56856 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN18P56856 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 AC142086.2-201ENST00000569753 217 ntBASIC18.66■□□□□ 0.58
CLDN18P56856 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLDN18P56856 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN18P56856 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLDN18P56856 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN18P56856 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN18P56856 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN18P56856 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLDN18P56856 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN18P56856 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN18P56856 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLDN18P56856 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN18P56856 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN18P56856 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN18P56856 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN18P56856 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN18P56856 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.64■□□□□ 0.57
CLDN18P56856 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CLDN18P56856 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN18P56856 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN18P56856 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN18P56856 MKRN4P-201ENST00000444706 1521 ntBASIC18.64■□□□□ 0.57
CLDN18P56856 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN18P56856 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN18P56856 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN18P56856 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN18P56856 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN18P56856 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN18P56856 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN18P56856 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN18P56856 CDV3P1-201ENST00000471403 739 ntBASIC18.63■□□□□ 0.57
CLDN18P56856 AL138781.1-201ENST00000566567 1274 ntBASIC18.63■□□□□ 0.57
CLDN18P56856 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.63■□□□□ 0.57
CLDN18P56856 FAM21FP-204ENST00000608637 956 ntBASIC18.63■□□□□ 0.57
CLDN18P56856 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN18P56856 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLDN18P56856 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLDN18P56856 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN18P56856 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN18P56856 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLDN18P56856 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN18P56856 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.62■□□□□ 0.57
CLDN18P56856 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN18P56856 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN18P56856 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms