Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.34■□□□□ 0.53
FOXG1P55316 AC007322.1-201ENST00000426983 750 ntBASIC18.34■□□□□ 0.53
FOXG1P55316 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXG1P55316 AC231657.2-201ENST00000624556 255 ntBASIC18.34■□□□□ 0.53
FOXG1P55316 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXG1P55316 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
FOXG1P55316 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.34■□□□□ 0.53
FOXG1P55316 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXG1P55316 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
FOXG1P55316 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FOXG1P55316 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXG1P55316 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
FOXG1P55316 AC026310.3-201ENST00000625186 2373 ntBASIC18.33■□□□□ 0.53
FOXG1P55316 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.33■□□□□ 0.53
FOXG1P55316 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FOXG1P55316 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
FOXG1P55316 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.33■□□□□ 0.52
FOXG1P55316 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.33■□□□□ 0.52
FOXG1P55316 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXG1P55316 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXG1P55316 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
FOXG1P55316 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.33■□□□□ 0.52
FOXG1P55316 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FOXG1P55316 AC068338.2-201ENST00000563278 1430 ntBASIC18.32■□□□□ 0.52
FOXG1P55316 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXG1P55316 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXG1P55316 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.32■□□□□ 0.52
FOXG1P55316 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXG1P55316 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXG1P55316 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
FOXG1P55316 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXG1P55316 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXG1P55316 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXG1P55316 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXG1P55316 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXG1P55316 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXG1P55316 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXG1P55316 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
FOXG1P55316 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXG1P55316 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXG1P55316 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.31■□□□□ 0.52
FOXG1P55316 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXG1P55316 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXG1P55316 AC005181.1-201ENST00000604782 1256 ntBASIC18.31■□□□□ 0.52
FOXG1P55316 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXG1P55316 AC013268.1-206ENST00000638368 961 ntBASIC18.31■□□□□ 0.52
FOXG1P55316 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXG1P55316 AC112229.1-201ENST00000639295 961 ntBASIC18.31■□□□□ 0.52
FOXG1P55316 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXG1P55316 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FOXG1P55316 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FOXG1P55316 AC007375.3-201ENST00000600936 2314 ntBASIC18.31■□□□□ 0.52
FOXG1P55316 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXG1P55316 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXG1P55316 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 AC091799.1-201ENST00000422823 811 ntBASIC18.3■□□□□ 0.52
FOXG1P55316 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXG1P55316 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
FOXG1P55316 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXG1P55316 AC243732.1-201ENST00000612648 864 ntBASIC18.3■□□□□ 0.52
FOXG1P55316 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXG1P55316 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXG1P55316 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXG1P55316 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXG1P55316 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXG1P55316 FEM1AP4-201ENST00000443167 1987 ntBASIC18.3■□□□□ 0.52
FOXG1P55316 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXG1P55316 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXG1P55316 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXG1P55316 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXG1P55316 AC245052.3-201ENST00000450182 901 ntBASIC18.29■□□□□ 0.52
FOXG1P55316 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXG1P55316 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.29■□□□□ 0.52
FOXG1P55316 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXG1P55316 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FOXG1P55316 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXG1P55316 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms