Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH12P55289 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH12P55289 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CDH12P55289 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
CDH12P55289 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH12P55289 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH12P55289 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.38■□□□□ 0.69
CDH12P55289 AC106739.1-201ENST00000617035 715 ntBASIC19.38■□□□□ 0.69
CDH12P55289 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH12P55289 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH12P55289 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH12P55289 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH12P55289 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH12P55289 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH12P55289 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.37■□□□□ 0.69
CDH12P55289 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDH12P55289 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 PLK5-205ENST00000642079 1969 ntBASIC19.37■□□□□ 0.69
CDH12P55289 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDH12P55289 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH12P55289 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDH12P55289 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH12P55289 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH12P55289 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH12P55289 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH12P55289 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH12P55289 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH12P55289 AC027682.1-201ENST00000562846 899 ntBASIC19.36■□□□□ 0.69
CDH12P55289 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH12P55289 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDH12P55289 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH12P55289 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
CDH12P55289 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH12P55289 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH12P55289 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH12P55289 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 AC073314.1-201ENST00000568729 2216 ntBASIC19.35■□□□□ 0.69
CDH12P55289 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH12P55289 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH12P55289 TSPY26P-201ENST00000476365 1326 ntBASIC19.35■□□□□ 0.69
CDH12P55289 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH12P55289 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH12P55289 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.35■□□□□ 0.69
CDH12P55289 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH12P55289 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH12P55289 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH12P55289 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDH12P55289 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 AP005212.1-201ENST00000581547 1997 ntBASIC19.35■□□□□ 0.69
CDH12P55289 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 GABARAPL3-202ENST00000624044 1851 ntBASIC19.35■□□□□ 0.69
CDH12P55289 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH12P55289 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDH12P55289 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CDH12P55289 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH12P55289 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 EDA-201ENST00000338901 1233 ntBASIC19.34■□□□□ 0.69
CDH12P55289 AP001330.3-201ENST00000520123 633 ntBASIC19.34■□□□□ 0.69
CDH12P55289 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH12P55289 AC110285.6-201ENST00000617652 491 ntBASIC19.34■□□□□ 0.69
CDH12P55289 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH12P55289 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
CDH12P55289 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CDH12P55289 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH12P55289 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH12P55289 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH12P55289 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
CDH12P55289 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms