Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.29■□□□□ 0.04
APOC4P55056 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.29■□□□□ 0.04
APOC4P55056 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.29■□□□□ 0.04
APOC4P55056 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.29■□□□□ 0.04
APOC4P55056 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APOC4P55056 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
APOC4P55056 MKRN4P-201ENST00000444706 1521 ntBASIC15.28■□□□□ 0.04
APOC4P55056 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.28■□□□□ 0.04
APOC4P55056 AL512625.2-201ENST00000417533 625 ntBASIC15.28■□□□□ 0.04
APOC4P55056 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.28■□□□□ 0.04
APOC4P55056 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.28■□□□□ 0.04
APOC4P55056 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.28■□□□□ 0.04
APOC4P55056 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.28■□□□□ 0.04
APOC4P55056 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APOC4P55056 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
APOC4P55056 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APOC4P55056 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.27■□□□□ 0.04
APOC4P55056 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APOC4P55056 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
APOC4P55056 C11orf96-202ENST00000528572 1834 ntBASIC15.27■□□□□ 0.04
APOC4P55056 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.27■□□□□ 0.04
APOC4P55056 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.27■□□□□ 0.04
APOC4P55056 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
APOC4P55056 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.27■□□□□ 0.04
APOC4P55056 MIR4758-201ENST00000577688 71 ntBASIC15.27■□□□□ 0.04
APOC4P55056 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
APOC4P55056 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
APOC4P55056 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOC4P55056 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOC4P55056 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
APOC4P55056 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APOC4P55056 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
APOC4P55056 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.26■□□□□ 0.03
APOC4P55056 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.26■□□□□ 0.03
APOC4P55056 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.26■□□□□ 0.03
APOC4P55056 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 AC133041.1-202ENST00000642053 222 ntBASIC15.26■□□□□ 0.03
APOC4P55056 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
APOC4P55056 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
APOC4P55056 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
APOC4P55056 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APOC4P55056 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.26■□□□□ 0.03
APOC4P55056 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.25■□□□□ 0.03
APOC4P55056 AC012676.1-201ENST00000574705 1949 ntBASIC15.25■□□□□ 0.03
APOC4P55056 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC15.25■□□□□ 0.03
APOC4P55056 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.25■□□□□ 0.03
APOC4P55056 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.25■□□□□ 0.03
APOC4P55056 AL138781.1-201ENST00000566567 1274 ntBASIC15.25■□□□□ 0.03
APOC4P55056 AC142086.2-201ENST00000569753 217 ntBASIC15.25■□□□□ 0.03
APOC4P55056 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 AC016405.3-201ENST00000607710 860 ntBASIC15.25■□□□□ 0.03
APOC4P55056 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.25■□□□□ 0.03
APOC4P55056 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
APOC4P55056 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
APOC4P55056 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms