Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ERFP50548 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.06■□□□□ 0.8
ERFP50548 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERFP50548 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERFP50548 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.05■□□□□ 0.8
ERFP50548 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ERFP50548 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
ERFP50548 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.05■□□□□ 0.8
ERFP50548 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.05■□□□□ 0.8
ERFP50548 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERFP50548 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
ERFP50548 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.04■□□□□ 0.8
ERFP50548 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
ERFP50548 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ERFP50548 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
ERFP50548 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.04■□□□□ 0.8
ERFP50548 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
ERFP50548 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ERFP50548 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ERFP50548 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 RARRES2P1-201ENST00000474487 481 ntBASIC20.03■□□□□ 0.8
ERFP50548 AC103724.3-201ENST00000564481 992 ntBASIC20.03■□□□□ 0.8
ERFP50548 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.03■□□□□ 0.8
ERFP50548 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.03■□□□□ 0.8
ERFP50548 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ERFP50548 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ERFP50548 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ERFP50548 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.02■□□□□ 0.8
ERFP50548 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ERFP50548 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.02■□□□□ 0.8
ERFP50548 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
ERFP50548 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
ERFP50548 AC098818.2-201ENST00000564925 2320 ntBASIC20.02■□□□□ 0.79
ERFP50548 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERFP50548 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ERFP50548 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.01■□□□□ 0.79
ERFP50548 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 YBX1P4-201ENST00000392794 808 ntBASIC20.01■□□□□ 0.79
ERFP50548 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.01■□□□□ 0.79
ERFP50548 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.01■□□□□ 0.79
ERFP50548 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ERFP50548 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ERFP50548 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ERFP50548 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ERFP50548 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ERFP50548 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20■□□□□ 0.79
ERFP50548 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ERFP50548 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20■□□□□ 0.79
ERFP50548 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms